weekly_run #27
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| name: "weekly_run" | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: "15 11 * * 3" | |
| jobs: | |
| weekly_run_fit: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.2.3' | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libudunits2-dev libcurl4-openssl-dev libgdal-dev | |
| - uses: r-lib/actions/setup-renv@v2-branch | |
| - name: Create output objects | |
| run: Rscript 'R/workflow/workflow_fit.R' | |
| - name: Commit files | |
| run: | | |
| git config user.email "[email protected]" | |
| git config user.name "GitHub Action - Output without sims" | |
| git add --all | |
| git commit -m "Build output files" | |
| git pull --rebase origin main | |
| git push | |
| echo "pushed to github" | |
| - name: Create issue about failure | |
| if: failure() && github.event_name != 'workflow_dispatch' | |
| run: | | |
| gh issue reopen 1234 | |
| weekly_run_sim: | |
| needs: weekly_run_fit | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.2.3' | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libudunits2-dev libcurl4-openssl-dev libgdal-dev | |
| - uses: r-lib/actions/setup-renv@v2-branch | |
| - name: Pull changes | |
| run: | | |
| git pull --rebase origin main | |
| - name: Create output objects | |
| run: Rscript 'R/workflow/workflow_sim.R' | |
| - name: Commit files | |
| run: | | |
| git config user.email "[email protected]" | |
| git config user.name "GitHub Action - Final Output" | |
| git add --all | |
| git commit -m "Build output files" | |
| git pull --rebase origin main | |
| git push | |
| echo "pushed to github" | |
| - name: Create issue about failure | |
| if: failure() && github.event_name != 'workflow_dispatch' | |
| run: | | |
| gh issue reopen 1234 |