Merge pull request #102 from FINNGEN/development

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FINNGEN · Dec 12, 2024 · 7699388 · 7699388
2 parents eee1605 + 150cb97
commit 7699388
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Showing 5 changed files with 9 additions and 9 deletions.
diff --git a/tests/manual/manualtest-mod_resultsVisualisation_CodeWAS.R b/tests/manual/manualtest-mod_resultsVisualisation_CodeWAS.R
@@ -50,9 +50,9 @@ devtools::load_all(".")
 
 pathToCO2AnalysisModulesConfigYalm  <-  testthat::test_path("config/atlasDemo_CO2AnalysisModulesConfig.yml")
 CO2AnalysisModulesConfig <- yaml::read_yaml(pathToCO2AnalysisModulesConfigYalm)
-options = list(launch.browser=FALSE, port = 5907)
+options = list(launch.browser=FALSE, port = 8561)
 
-browseURL(paste0("http://localhost:5907/?analysisType=codeWAS&pathToResultsDatabase=", pathToResultsDatabase))
+browseURL(paste0("http://localhost:8561/?analysisType=codeWAS&pathToResultsDatabase=", pathToResultsDatabase))
 run_app(CO2AnalysisModulesConfig, options = options)
 
 
diff --git a/tests/manual/manualtest-mod_resultsVisualisation_CohortsDemographics.R b/tests/manual/manualtest-mod_resultsVisualisation_CohortsDemographics.R
@@ -48,7 +48,7 @@ devtools::load_all(".")
 
 pathToCO2AnalysisModulesConfigYalm  <-  testthat::test_path("config/atlasDemo_CO2AnalysisModulesConfig.yml")
 CO2AnalysisModulesConfig <- yaml::read_yaml(pathToCO2AnalysisModulesConfigYalm)
-options = list(launch.browser=FALSE, port = 5907)
+options = list(launch.browser=FALSE, port = 8561)
 
-browseURL(paste0("http://localhost:5907/?analysisType=cohortDemographics&pathToResultsDatabase=", pathToResultsDatabase))
+browseURL(paste0("http://localhost:8561/?analysisType=cohortDemographics&pathToResultsDatabase=", pathToResultsDatabase))
 run_app(CO2AnalysisModulesConfig, options = options)
diff --git a/tests/manual/manualtest-mod_resultsVisualisation_CohortsOverlaps.R b/tests/manual/manualtest-mod_resultsVisualisation_CohortsOverlaps.R
@@ -46,9 +46,9 @@ devtools::load_all(".")
 
 pathToCO2AnalysisModulesConfigYalm  <-  testthat::test_path("config/atlasDemo_CO2AnalysisModulesConfig.yml")
 CO2AnalysisModulesConfig <- yaml::read_yaml(pathToCO2AnalysisModulesConfigYalm)
-options = list(launch.browser=FALSE, port = 5907)
+options = list(launch.browser=FALSE, port = 8561)
 
-browseURL(paste0("http://localhost:5907/?analysisType=cohortOverlaps&pathToResultsDatabase=", pathToResultsDatabase))
+browseURL(paste0("http://localhost:8561/?analysisType=cohortOverlaps&pathToResultsDatabase=", pathToResultsDatabase))
 run_app(CO2AnalysisModulesConfig, options = options)
 
 
diff --git a/tests/manual/manualtest-mod_resultsVisualisation_TimeCodeWAS.R b/tests/manual/manualtest-mod_resultsVisualisation_TimeCodeWAS.R
@@ -56,9 +56,9 @@ devtools::load_all(".")
 
 pathToCO2AnalysisModulesConfigYalm  <-  testthat::test_path("config/atlasDemo_CO2AnalysisModulesConfig.yml")
 CO2AnalysisModulesConfig <- yaml::read_yaml(pathToCO2AnalysisModulesConfigYalm)
-options = list(launch.browser=FALSE, port = 5907)
+options = list(launch.browser=FALSE, port = 8561)
 
-browseURL(paste0("http://localhost:5907/?analysisType=timeCodeWAS&pathToResultsDatabase=", pathToResultsDatabase))
+browseURL(paste0("http://localhost:8561/?analysisType=timeCodeWAS&pathToResultsDatabase=", pathToResultsDatabase))
 run_app(CO2AnalysisModulesConfig, options = options)
 
 
diff --git a/tests/manual/manualtest-run_app.R b/tests/manual/manualtest-run_app.R
@@ -8,7 +8,7 @@ source(testthat::test_path("helper.R"))
 run_app(
   CO2AnalysisModulesConfig = test_CO2AnalysisModulesConfig,
   options = list(
-    port = 5907,
+    port = 8561,
     launch.browser=TRUE
     )
   )