MAPL 2.2 Release

This is a minor release of MAPL. All testing so far shows it to be zero-diff when running the GEOS GCM. However, it does contain a number of updates and fixes to MAPL 2.1.

NOTE: To use this version of MAPL requires a Baselibs of 6.0.13 or higher. It now requires gFTL, gFTL-shared, yaFyaml, and pFlogger.

Added

• Added LLC grid factory
• Added support for wildcard expansions (using regex)
• Added "public" for 2 interfaces: ESMFL_Diff, and ESMFL_statistics
• Added support for sampling along a 1-D timeseries in History
• Introduced generic subdirectory
• String.F90 - encapsulates deferred length strings
• Added target "build-tests" that will build all tests. This will enable
  ctest to be more selective about which tests.
• Added ability of MAPL_GridCompGetFriendlies to recurse its children
• Added esma_add_subdirectory(ESMA_env) to CMakeLists.txt to allow
  installation of various files to the bin and etc directories under
  install prefix
• Added wildcard support for short name in automatic code generator for
  gridded components.
• Added new CI test for building GCM on pull request

Changed

• Refactored aliases in python automatic code generator. Now aliases
  are tailored per column. This allows T/F to be safely used as
  aliases for .true./.false. without risking things like the short
  name of Temperature.

• Move to use Baselibs 6.0.13

  • Update CI to use Baselibs 6.0.13 (GCC 9.3.0)
  • Update components.yaml
    • ESMA_env v2.1.5
    • ESMA_cmake v3.0.3

• Updates for JEDI/ecbuild compatibility

  • Updates to CMake to use NOINSTALL
  • Update components.yaml to use NOINSTALL
    • ESMA_cmake v3.0.6
    • ecbuild geos/v1.0.5

• Renamed MAPL_Profiler executable demo.x to profiler.x

• Renamed directories. Sub-libraries now named MAPL.

  • ./MAPL_Base => ./base (MAPL.base)
  • ./GMAO_pFIO => ./pfio
  • ./MAPL_Profiler => ./profiler
  • ./MAPL_Shared => ./shared

• Updated components.yaml to use ESMA_env and ESMA_cmake if
  building MAPL as standalone

Removed

• Removed duplicate Python directory
• Removed CircleCI

Changes needed for S2S Integration

In concert with GEOS-ESM/GEOSgcm_GridComp#293, changes were made to MAPL:

• Added MODE argument to MAPL_RecordAlarmIsNeeded. This is in sync with "yuri-s2s3-unstable-SLES12" CVS tag. Needed for "dual ocean"
• Fixed logger creation (similar fix was already applied to develop branch to fix issue #397)

Fix for Regrid_Util.x

Fixed

• Initialize pFlogger in Regrid_Util.x

Fix for MPI_Finalize and Logging issues

Changed

• MAPL now requires Baselibs 6.0.12 (pFlogger v1.4.1)
  • Update CI to use Baselibs 6.0.12
  • Update components.yaml
    • ESMA_env v2.1.2
    • ESMA_cmake v3.0.2

Fixed

• Fix for MPI_Finalize error with Intel MPI
• Fix ArrDescrInit routine
• Fixes for ESMF logging (when run with MULTI)

Removed

• Remove MPI_comm_set_errhandler workaround

Fix tripolar output

Fixes a bug with Extdata and replay
Fixes a bug introduced in v2.1.0 with output fields on Tripolar grids in History.

Fixes for logger and MPT

Zero-diff updates:

Fixed

• Added a default initialization clause for pFlogger so that INFO messages go to console.
• Workaround for MPT 2.17 build bug with MPI_Comm_set_errhandler

MPT Fix for MAPL 2.0

Fixed

• Workaround for MPT 2.17 build bug with MPI_Comm_set_errhandler

MAPL 2.1 Initial Release

This is a minor release of MAPL. All testing so far shows it to be zero-diff when running the GEOS GCM. However, it does contain a number of updates and fixes to MAPL 2.0.

NOTE: To use this version of MAPL requires a Baselibs of 6.0.10 or higher. It now requires gFTL, gFTL-shared, yaFyaml, and pFlogger.

Changed

• Corrected handling of Equation of Time in orbit (off by default)
• Made ASSERT in ExtData more explicit in case of missing variables.
• (re) Introduced MAPL Profiling package
• Improved diagnostic message in HistoryGridComp for misspelled fields/bundles
• Removed CVS keywords

Fixed

• Corrected Python code generator scripts for component import/export specs.
• Add directories to .gitignore for building with mepo
• Bug building with mixed Intel/GCC compilers
• Implemented workaround to cmake error that happens when building tests in parallel.
• Set correct ESMA_env tag in components.yaml
• Updated components.yaml to be inline with GEOSgcm
• Minor problem in GMAO_pFIO Cmakelists (consistency with PRIVATE)

Removed

• Removed support for checkout_externals and moved solely to mepo
  • Removed Externals.cfg
  • Removed checkout_externals code in CMakeLists.txt

Added

• Added configuration for CircleCI and Github Actions
  • Builds MAPL using GCC 9.2.0 and Open MPI 4.0.2
  • Builds and runs pFIO_tests and MAPL_Base_tests
• Add precession of equinox (not on by default)
• Imported Python/MAPL subdir (old, but never imported to GitHub)
• Python automatic code generator for grid comp include files
• Added support to use pFlogger for logging
  • Command line option: --logging_config=

Fix to suppress MPI_Finalize errors

Added code to suppress (seemingly) spurious MPI_Finalize errors at end of model run. Suppression does not happen if built with -DCMAKE_BUILD_TYPE=Debug

Fix for MPI Tag

This release fixes an issue with a "too-large" MPI tag that presents on SLES 12 at NCCS.