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Additional diann fdr#291

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mschwoer wants to merge 16 commits intorefactor_fdrMannLabs/alphabase:refactor_fdrfrom additional_diann_fdrMannLabs/alphabase:additional_diann_fdrCopy head branch name to clipboard

+280-28

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Commits on Jan 23, 2025

• add anndata dependency

  mschwoer

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  e220205

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• filter DIANN by extra FDR values

  mschwoer

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  b966145

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• add tests

  mschwoer

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  4f0879d

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• fix

  mschwoer

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  9adf036

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• add test for nan

  mschwoer

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  e018bac

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• adjust to refactored code

  mschwoer

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  dac81e1

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• adjust to refactored code

  mschwoer

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  c06e05c

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• reorganize constructors

  mschwoer

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  6185c6f

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• temporarily skip tests

  mschwoer

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  adc3cbd

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• add new logic and new test references

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  242fdb9

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Commits on Jan 24, 2025

• Revert "add new logic and new test references"

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  mschwoer

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  08f62b4

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• add new filtering logic

  mschwoer

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  b4c67dc

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• add method to steer reader behaviour

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  b7441e4

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• switch on filters and adapt test data

  mschwoer

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  2bef455

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• small improvements

  mschwoer

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  4d9ce70

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• fix tests

  mschwoer

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  f44cca3

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