Merge pull request #537 from broadinstitute/mw/fix_ancestry_pca_paths

Move PCA files to under ancestry_inference
broadinstitute · Dec 7, 2023 · e5ffe2e · e5ffe2e
2 parents 8b140ab + 3bcc34c
commit e5ffe2e
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/gnomad_qc/v4/resources/sample_qc.py b/gnomad_qc/v4/resources/sample_qc.py
@@ -1,4 +1,5 @@
 """Script containing sample QC related resources."""
+
 from typing import Optional
 
 from gnomad.resources.resource_utils import (
@@ -590,7 +591,7 @@ def _get_ancestry_pca_ht_path(
     :return: Path to requested ancestry PCA file.
     """
     return (
-        f"{get_sample_qc_root(version, test, data_type)}/gnomad.{data_type}.v{version}.pca_{part}{'_with_unreleasable_samples' if include_unreleasable_samples else ''}.ht"
+        f"{get_sample_qc_root(version, test, data_type)}/ancestry_inference/gnomad.{data_type}.v{version}.pca_{part}{'_with_unreleasable_samples' if include_unreleasable_samples else ''}.ht"
     )