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Giotto v4.1.5#1066

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jiajic merged 33 commits intosuitedrieslab/Giotto:suitefrom suite_devdrieslab/Giotto:suite_devCopy head branch name to clipboardNov 8, 2024

+198-81

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Commits on Oct 16, 2024

• temp

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Commits on Oct 30, 2024

• chore: bump version for dev and drop remotes

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• Merge pull request #1062 from jiajic/suite_dev

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Commits on Nov 1, 2024

• Merge branch 'suite' into suite_dev

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Commits on Nov 6, 2024

• Update convenience_xenium.R

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• Revert "temp"

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• Merge branch 'suite_dev' into xen_update

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• Update convenience_xenium.R

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• temporarily lower R ver

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• Update convenience_xenium.R

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• Update convenience_xenium.R

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• Update convenience_xenium.R

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• Update convenience_xenium.R

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Commits on Nov 7, 2024

• fix tif path checking

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  0157ba8

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• Update convenience_xenium.R

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  2eb20b5

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• fix: allow overwrite passing though ...

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• fix: change when image input type is checked

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• fix: missing comma

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• fix: warning that the "focus" dir does not exist

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• fix: focus img dir assignment

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• Update convenience_xenium.R

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• fix: ignore subdirectories within image focus dir

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• add centroid creation step

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• Update convenience_xenium.R

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• enh: update conv. fun

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• revert default changes

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• update prints and run docs

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  7f70a92

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• Revert "temporarily lower R ver"

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• Merge pull request #1064 from jiajic/xen_update

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• chore: update news

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Commits on Nov 8, 2024

• chore: update news

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• chore: add back remotes

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• Merge pull request #1065 from jiajic/suite_dev

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