Plot distribution of effects in top 100 DMPs #374
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11 warnings
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ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L34
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=34,col=18,[seq_linter] 1:nrow(...) is likely to be wrong in the empty edge case. Use seq_len(nrow(...)) instead.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L53
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=53,col=32,[extraction_operator_linter] Use `[[` instead of `[` to extract an element.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L63
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=63,col=16,[extraction_operator_linter] Use `[[` instead of `[` to extract an element.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L64
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=64,col=16,[extraction_operator_linter] Use `[[` instead of `[` to extract an element.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L66
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=66,col=33,[nonportable_path_linter] Use file.path() to construct portable file paths.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L67
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=67,col=32,[nonportable_path_linter] Use file.path() to construct portable file paths.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L102
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=102,col=39,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L102
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=102,col=74,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L103
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=103,col=42,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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Super-linter:
array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r#L104
file=/github/workspace/array/DNAm/analysis/EWAS/summariseWithinCTDMPs.r,line=104,col=42,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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