Merge branch 'master' into add-conda-env #385
sof202Annotations
10 warnings
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L24
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=24,col=16,[extraction_operator_linter] Use `[[` instead of `[` to extract an element.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L26
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=26,col=11,[paste_linter] Construct file paths with file.path(...) instead of paste0(x, "/", y, "/", z). Note that paste() converts empty inputs to "", whereas file.path() leaves it empty.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L26
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=26,col=28,[absolute_path_linter] Do not use absolute paths.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L26
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=26,col=28,[nonportable_path_linter] Use file.path() to construct portable file paths.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L27
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=27,col=15,[paste_linter] Construct file paths with file.path(...) instead of paste0(x, "/", y, "/", z). Note that paste() converts empty inputs to "", whereas file.path() leaves it empty.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L53
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=53,col=24,[nonportable_path_linter] Use file.path() to construct portable file paths.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L56
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=56,col=13,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L56
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=56,col=41,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L56
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=56,col=62,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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Lint code base:
array/DNAm/preprocessing/CETYGOdeconvolution.r#L58
file=/github/workspace/array/DNAm/preprocessing/CETYGOdeconvolution.r,line=58,col=12,[extraction_operator_linter] Use `[[` instead of `$` to extract an element.
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