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jamesmbaazam committed Nov 30, 2023
1 parent 1d38e61 commit 3fe6637
Showing 1 changed file with 31 additions and 31 deletions.
62 changes: 31 additions & 31 deletions tests/testthat/_snaps/epichains.md
Original file line number Diff line number Diff line change
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< tree head (from first known ancestor) >
chain_id sim_id ancestor generation time
11 1 2 1 2 3
12 2 2 1 2 3
13 3 2 1 2 3
15 4 2 1 2 3
17 5 2 1 2 3
20 6 2 1 2 3
chain_id sim_id ancestor generation time
11 1 2 1 2 2.6525084
16 2 2 1 2 0.2397245
17 4 2 1 2 0.9737101
21 5 2 1 2 0.2385887
24 6 2 1 2 1.7212668
26 7 2 1 2 1.3509058
< tree tail >
chain_id sim_id ancestor generation time
131 10 19 9 4 9
81 2 20 6 4 9
103 4 20 9 4 9
104 4 21 9 4 9
105 4 22 9 4 9
106 4 23 9 4 9
chain_id sim_id ancestor generation time
123 9 15 8 5 19.146936
89 2 16 8 4 2.941326
124 9 16 8 5 17.447014
110 10 16 9 4 17.017684
90 2 17 9 4 7.368167
91 2 18 9 4 7.931447
Chains simulated: 10
Number of ancestors (known): 9
Number of generations: 5
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Output
`epichains` object
[1] 1 3
[1] 9 6
Simulated chain lengths:
Max: 3
Min: 1
Max: 9
Min: 6

# head and tail print output as expected

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Output
< tree head (from first known ancestor) >
chain_id sim_id ancestor generation time
11 1 2 1 2 3
12 2 2 1 2 3
13 3 2 1 2 3
15 4 2 1 2 3
17 5 2 1 2 3
20 6 2 1 2 3
chain_id sim_id ancestor generation time
11 1 2 1 2 2.6525084
16 2 2 1 2 0.2397245
17 4 2 1 2 0.9737101
21 5 2 1 2 0.2385887
24 6 2 1 2 1.7212668
26 7 2 1 2 1.3509058

---

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< tree tail >
chain_id sim_id ancestor generation time
131 10 19 9 4 9
81 2 20 6 4 9
103 4 20 9 4 9
104 4 21 9 4 9
105 4 22 9 4 9
106 4 23 9 4 9
chain_id sim_id ancestor generation time
123 9 15 8 5 19.146936
89 2 16 8 4 2.941326
124 9 16 8 5 17.447014
110 10 16 9 4 17.017684
90 2 17 9 4 7.368167
91 2 18 9 4 7.931447

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