Repositories list

• CAA_PPCC

  Public
  1•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• Beyond-Auxotrophy-Pipeline

  Public
  R

  •0•0•0•0•Updated Jun 1, 2024Jun 1, 2024

• ps117_metaP

  Public
  Code for data analysis and plots for the PS117 paper. This includes metaproteomics data normalization and differential expression analysis etc.

  R

  •

  MIT License

  •0•0•0•0•Updated Jul 4, 2023Jul 4, 2023

• antiox-review

  Public
  data analysis for review on phytoplankton antioxidants

  R

  •0•0•0•0•Updated Oct 28, 2021Oct 28, 2021

• mn-fe-allocation

  Public
  proteomic allocation model of a diatom controlled by Mn and Fe

  R

  •0•0•0•0•Updated Oct 21, 2021Oct 21, 2021

• lab_openms_scripts

  Public
  Bash scripts and suggestions for running database searching and quantification

  Shell

  •0•0•0•0•Updated May 27, 2021May 27, 2021

• ross-sea-meta-omics

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Apr 9, 2021Apr 9, 2021

• cobia

  Public
  cobia: Prediction and consequences of cofragmentation in metaproteomics

  R

  •

  MIT License

  •0•0•0•0•Updated Nov 24, 2020Nov 24, 2020

• phaeo-mn-fe

  Public
  Phaeocystis antarctica Fe / Mn experiment analyses

  R

  •0•0•0•0•Updated Apr 18, 2019Apr 18, 2019

• tmt-normalization

  Public
  R

  •1•0•0•0•Updated Oct 18, 2018Oct 18, 2018

• Softmax-Platereader-Functions

  Public
  Functions for reading in data from the SoftMax software for a 96 well plate

  R

  •1•1•0•0•Updated May 8, 2018May 8, 2018