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added call to plotting function to generate plots for all subtypes CI #271: Commit c4dc6fc pushed by ashuaibi7
January 21, 2025 21:09 15s main
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January 21, 2025 21:09 15s
added plotting function to highlight mutation count difference betwee… CI #270: Commit 04fd870 pushed by ashuaibi7
January 21, 2025 21:09 15s main
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January 21, 2025 21:09 15s
resolved underflow to nan issue when computing total probability and … CI #269: Commit 51ec207 pushed by ashuaibi7
January 21, 2025 12:43 13s main
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January 21, 2025 12:43 13s
made formatting changes CI #268: Commit aee2f88 pushed by ashuaibi7
January 20, 2025 20:22 11s main
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January 20, 2025 20:22 11s
modified cbase analysis to generate upset plot of highly ranked likel… CI #267: Commit fee4b66 pushed by ashuaibi7
January 20, 2025 19:31 10s main
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January 20, 2025 19:31 10s
created plotting function to generate upset plot of high ranked likel… CI #266: Commit cf795ba pushed by ashuaibi7
January 20, 2025 19:30 10s main
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January 20, 2025 19:30 10s
created script to call and create cbase decoy gene fraction bar plot CI #265: Commit 5229e3e pushed by ashuaibi7
January 20, 2025 18:59 14s main
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January 20, 2025 18:59 14s
added plot to visualize fraction of top ranked cbase genes that are h… CI #264: Commit ea8253f pushed by ashuaibi7
January 20, 2025 18:56 14s main
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January 20, 2025 18:56 14s
modified calls to pass in threshold to generate script and use argume… CI #263: Commit 5cba9c0 pushed by ashuaibi7
January 20, 2025 17:14 11s main
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January 20, 2025 17:14 11s
modified argument parser for generate command to accept threshold arg… CI #262: Commit 195d400 pushed by ashuaibi7
January 20, 2025 17:13 11s main
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January 20, 2025 17:13 11s
modified generation with cbase to pass in a threshold to q values scr… CI #261: Commit 7bc5cb5 pushed by ashuaibi7
January 20, 2025 17:11 15s main
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January 20, 2025 17:11 15s
auto formatted with black and added argument for threshold in generat… CI #260: Commit 8aac25b pushed by ashuaibi7
January 20, 2025 17:09 11s main
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January 20, 2025 17:09 11s
modified identify script to track and save cbase p values for each ge… CI #259: Commit af2683f pushed by ashuaibi7
January 20, 2025 15:15 11s main
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January 20, 2025 15:15 11s
added instance variable for cbase p value to track in results tables CI #258: Commit cb6353c pushed by ashuaibi7
January 20, 2025 15:14 14s main
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January 20, 2025 15:14 14s
developed script to compute and create distribution plot of high muta… CI #257: Commit 74844c5 pushed by ashuaibi7
January 20, 2025 15:05 11s main
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January 20, 2025 15:05 11s
added functionality to create plot of sample mutation count distribut… CI #256: Commit 95c14d2 pushed by ashuaibi7
January 20, 2025 15:05 12s main
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January 20, 2025 15:05 12s
modify COADREAD to CRAD abbreviation in decoy genes folder CI #255: Commit 13dea76 pushed by ashuaibi7
January 20, 2025 15:03 14s main
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January 20, 2025 15:03 14s
updated decoy gene proportion plot to allow for three different compu… CI #254: Commit 3f39033 pushed by ashuaibi7
January 17, 2025 21:02 14s main
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January 17, 2025 21:02 14s
modify plotting to properly update cooccurrence plot to contain relev… CI #253: Commit 2978cfe pushed by ashuaibi7
January 17, 2025 20:38 11s main
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January 17, 2025 20:38 11s
updated script to use unified postprocessing in creation of ranked ta… CI #252: Commit ff0689d pushed by ashuaibi7
January 17, 2025 20:17 11s main
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January 17, 2025 20:17 11s
updated plotting methods to use postprocessing methods for easier and… CI #251: Commit 3f233b1 pushed by ashuaibi7
January 17, 2025 19:47 10s main
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January 17, 2025 19:47 10s
added argument parser defaults to speed up testing and updated codeba… CI #250: Commit 247e56e pushed by ashuaibi7
January 17, 2025 19:46 11s main
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January 17, 2025 19:46 11s
modified top ranking table creation to use postprocessing methods and… CI #249: Commit b51fd42 pushed by ashuaibi7
January 16, 2025 22:31 11s main
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January 16, 2025 22:31 11s
modify sort column to use boolean value for whether sorting should be… CI #248: Commit 9bf02b5 pushed by ashuaibi7
January 16, 2025 22:18 12s main
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January 16, 2025 22:18 12s
modify meco argument indicating whether to rank based on ME or CO to … CI #247: Commit 1e3e99b pushed by ashuaibi7
January 16, 2025 22:13 11s main
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January 16, 2025 22:13 11s