mkdir -> fs::dir_create

umccr · Jun 14, 2024 · f5e500e · f5e500e
1 parent 437936a
commit f5e500e
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Showing 4 changed files with 1 addition and 28 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -13,7 +13,6 @@ export(generate_cpsr_report)
 export(get_insilico_prediction_statistics)
 export(get_max_rows_pr_datatable)
 export(load_germline_snv_indel)
-export(mkdir)
 export(plot_summary_statistics)
 export(plot_virtual_panels)
 export(retrieve_secondary_calls)

diff --git a/R/utils.R b/R/utils.R
@@ -314,16 +314,3 @@ check_variant2cancer_phenotype <- function(cpg_calls, ref_data) {
   }
   return(cpg_calls)
 }
-
-#' Create directory
-#'
-#' @param d Directory to create.
-#'
-#' @export
-mkdir <- function(d) {
-  if (!dir.exists(d)) {
-    dir.create(d, recursive = TRUE)
-  }
-  TRUE
-}
-
diff --git a/R/utils_shortcuts.R b/R/utils_shortcuts.R
@@ -12,6 +12,7 @@ utils::globalVariables(c("."))
 #' @noRd
 dummy1 <- function() {
   # Solves R CMD check: Namespaces in Imports field not imported from
+  glue::glue
   DT::datatable
   htmltools::br
   shiny::bootstrapPage

diff --git a/man/mkdir.Rd b/man/mkdir.Rd