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Refactor orientation mapping3#1

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viljarjf merged 76 commits intoviljarjf:mainviljarjf/pyxem:mainfrom CSSFrancis:refactor_orientation_mapping3CSSFrancis/pyxem:refactor_orientation_mapping3Copy head branch name to clipboardJun 11, 2024

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Commits on May 9, 2024

• Update: Update versions

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Commits on May 24, 2024

• Merge pull request pyxem#1075 from CSSFrancis/post-release

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Commits on May 27, 2024

• Fixed indexing error

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Commits on May 28, 2024

• Updated changelog

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Commits on May 29, 2024

• Testing: Add Test for mask+center_of_mass

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• Merge pull request pyxem#1080 from sivborg/direct_beam_com_fix

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• BugFix: Fix "Broken" link

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• Merge pull request pyxem#1083 from CSSFrancis/fix_link_check

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• New Feature: Add Template Matching with dilated windowed template

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• Documentation: Add example and docstrings

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• BugFix: Update how volume is computed.

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• BugFix: Update how volume is computed.

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• BugFix: Fix normalization bug

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• BugFix: Float 64 dtype

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• Refactor: Move match_template_dilate

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• BugFix: Fix labeled vectors to markers.

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• BugFix: Fix Template Matching with circular window.

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• Documentation: Add to CHANGELOG.rst

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Commits on May 31, 2024

• Addition: Add Extra files for tutorials.

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• New Feature: Add new datasets to data repo from zenodo.

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• Documentation: Add to CHANGELOG.rst

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• Testing: Add testing for circular Background

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• Refactor: Changes per @hakonanes

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Commits on Jun 1, 2024

• Merge pull request pyxem#1084 from CSSFrancis/adjust_template_matching

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Commits on Jun 4, 2024

• Merge pull request pyxem#1081 from CSSFrancis/updated_data

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Commits on Jun 5, 2024

• Documentation: Add additional information about averaging neighboring patterns.

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• Documentation: Add Hough Transform example.

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• Documentation: Add CHANGELOG.rst

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• Refactor: Clean up Examples

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• Refactor: Remove Long Running Examples

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• Documentation: Fix Formatting

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Commits on Jun 6, 2024

• Merge pull request pyxem#1082 from CSSFrancis/Update-documentation

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• Refactor: Moved orientation mapping to polar_diffraction2d.py

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• New Feature: Added OrientationMap class

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• Refactor: Clean up OrientationMap class

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• Bugfix: Fix OrientationMap error

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• Bugfix: transpose polar image to match

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• Testing: Add tests for orientation mapping

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• Refactor: Avoid testing for signal size

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• BugFix: Fix regression with rebase

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• BugFix: Remove test

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• New Feature: Added OrientationMap class

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• Implement to_markers

  

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• Type hints and colors

  

  viljarjf

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• Implement to_navigator and to_single_phase_orientations

  

  viljarjf

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• Change units of in-plane angle to degrees

  

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• Refactor to_marker

  

  viljarjf

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• BugFix: Fix regression from rebase

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• Documentation: Add example

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• Documentation: Clean up Example for on_zone_orientation.py

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• Documentation: Add examples for simulating multiple phases.

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• Update: Update diffsims version

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• Update: Update tests for grain orientation.

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• Add low-index simulations

  

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• Translate angle index to degrees

  

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• Update test to use si_phase_simple

  

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• Testing: Remove unused tests

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• Plotting: Add plotting for diffracting intensity

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• Plotting: Add plotting of ipf

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• Refactor:Add kwargs

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• New Feature: Add to CrystalMap

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• New Feature: Add to CrystalMap

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• Refactor: Refactor indexation_results.py

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• Testing: Test to_crystal_map function

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• Testing: Test to_crystal_map function for multiple phases

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• Try to ensure correct conventions is followed

  

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• Rebase: Follow up for Rebase

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• Refactor: Fix Tests

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• BugFix: Fix Examples

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• Version: diffsims == 0.6.rc1

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• Visualization: Add marker for IPF visualization

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• Testing: Added new tests to cover new class and fixed up documentation.

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• Testing: Update Oldest

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• Refactor: rename simulated_fe.py

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• Testing: ++ min matplotlib version

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• Refactor: References

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