revery gds readonly status #357
Annotations
11 warnings
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ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L24
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=24,col=16,[extraction_operator_linter] Use `[[` instead of `[` to extract an element.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L25
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=25,col=15,[extraction_operator_linter] Use `[[` instead of `[` to extract an element.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L27
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=27,col=11,[paste_linter] Construct file paths with file.path(...) instead of paste0(x, "/", y, "/", z). Note that paste() converts empty inputs to "", whereas file.path() leaves it empty.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L27
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=27,col=28,[absolute_path_linter] Do not use absolute paths.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L27
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=27,col=28,[nonportable_path_linter] Use file.path() to construct portable file paths.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L28
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=28,col=10,[paste_linter] Construct file paths with file.path(...) instead of paste0(x, "/", y, "/", z). Note that paste() converts empty inputs to "", whereas file.path() leaves it empty.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L28
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=28,col=27,[absolute_path_linter] Do not use absolute paths.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L28
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=28,col=27,[nonportable_path_linter] Use file.path() to construct portable file paths.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L29
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=29,col=13,[paste_linter] Construct file paths with file.path(...) instead of paste0(x, "/", y, "/", z). Note that paste() converts empty inputs to "", whereas file.path() leaves it empty.
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Super-linter:
array/DNAm/preprocessing/calcQCMetrics.r#L29
file=/github/workspace/array/DNAm/preprocessing/calcQCMetrics.r,line=29,col=30,[absolute_path_linter] Do not use absolute paths.
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